teemi#
Scientific Python toolkit
Reproducible design-build-test-learn workflows for microbial strain engineering
teemi helps scientists and engineers connect sequence design, cloning workflows,
laboratory tracking, and downstream analysis in notebook-friendly pipelines.
The project is for researchers who want a practical Python toolkit for moving from biological design ideas to documented build plans, test workflows, and analysis outputs in one place.
The name teemi comes from the Greek goddess of fairness, reflecting the project's goal of making
bioengineering more FAIR: findable, accessible, interoperable, and reusable.
Start here#
What problem teemi solves#
teemi is most useful when a workflow spans several stages of strain construction and you want the same codebase
to support design decisions, experiment planning, sample tracking, and downstream analysis.
Citation#
If you use teemi in scientific work, cite the project publication: teemi in PLOS Computational Biology.
Documentation